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RStudio Startup with error while checking for updates and also very slow since today (07-03-2019)


Error convering character value to monthly data with as.yearmon (zoo)Trouble with googlevis using Knitr HTML in RStudio 0.98.94strwidth: How to get the correct width for umlauts and other accented/special characters?knitr Czech diacritis in chunk end up in wrong UTF8 charCouldn't quit R session or couldn't quit RStudiosave plot from graphics device 2 in Rstudio does not workError in curl::curl_fetch_memory(url, handle = handle) : Failed to connect to 127.0.0.1 port 5000: Connection refusedCannot read Chinese Char from SQL into RError detecting locale with shinyapps.ioError related to load table in R













0















I'm running the latest R version, 3.5.2 64-bit
the latest RStudio version, 1.1.463
and since today I suddenly run into the following problems:



1) RStudio gives an error ON STARTING UP: 'An error occurred while checking for updates. Unable to establish connection with R session.

2) It is slow on starting, it is slow on loading the workspace, and it is much slower to run code (working on R shiny app), and that seems to be true for all code files.

3) I get errors about the data.table packages:




Loading required package: data.table Warning in library(package,
lib.loc = lib.loc, character.only = TRUE, logical.return = TRUE, :

there is no package called ‘data.table’




I already removed RStudio completely,

ran registry cleaner freeware,

reinstalled a new download of RStudio

updated all packages

removed all .Rdata files that I could find

reinstalled Rstudio again....

and rebooted the laptop several times in between.



still slow, and still the errors mentioned above...



I'm clueless what is going on beyond what I tried, does anyone have a clue?



Yesterday it was all working fine, and now it's not. I did not update anything today on my laptop, the routine is the usual, I start my R Shiny App that I'm working on, and this runs



if(!require('shiny')) install.packages('shiny')


for all packages I need for it.
As I said, it already goes wrong on starting RStudio, and all R code executions seem slow, not just my 1 app.



Memory usage by rstudio.exe *32 and rsession.exe are both around 300,000 K, so that doesn't seem to be unusual either.



here is my session info:



 sessionInfo()
R version 3.5.2 (2018-12-20)
Platform: x86_64-w64-mingw32/x64 (64-bit)
Running under: Windows 7 x64 (build 7601) Service Pack 1

Matrix products: default

locale:
[1] LC_COLLATE=Dutch_Netherlands.1252 LC_CTYPE=Dutch_Netherlands.1252
[3] LC_MONETARY=Dutch_Netherlands.1252 LC_NUMERIC=C
[5] LC_TIME=Dutch_Netherlands.1252

attached base packages:
[1] grid stats graphics grDevices utils datasets methods
[8] base

other attached packages:
[1] flowPeaks_1.26.0 PerformanceAnalytics_1.5.2
[3] xts_0.11-2 zoo_1.8-4
[5] gtools_3.8.1 lemon_0.4.3
[7] gridExtra_2.3 pryr_0.1.4
[9] scales_1.0.0 stringi_1.3.1
[11] V8_2.0 taRifx_1.0.6.1
[13] webshot_0.5.1 broom_0.5.1
[15] forcats_0.4.0 stringr_1.4.0
[17] dplyr_0.8.0.1 purrr_0.3.1
[19] readr_1.3.1 tibble_2.0.1
[21] tidyverse_1.2.1 randomForest_4.6-14
[23] yaml_2.2.0 plyr_1.8.4
[25] colourpicker_1.0 DT_0.5
[27] tidyr_0.8.3 htmlwidgets_1.3
[29] plotly_4.8.0 ggplot2_3.1.0
[31] bit64_0.9-7 bit_1.1-14
[33] lubridate_1.7.4 shinyWidgets_0.4.5
[35] shinyjqui_0.3.2 shinyjs_1.0
[37] shinydashboard_0.7.1 shinyBS_0.61
[39] shiny_1.2.0

loaded via a namespace (and not attached):
[1] httr_1.4.0 jsonlite_1.6 viridisLite_0.3.0 modelr_0.1.4
[5] assertthat_0.2.0 cellranger_1.1.0 pillar_1.3.1 backports_1.1.3
[9] lattice_0.20-38 quadprog_1.5-5 glue_1.3.0 digest_0.6.18
[13] promises_1.0.1 rvest_0.3.2 colorspace_1.4-0 htmltools_0.3.6
[17] httpuv_1.4.5.1 pkgconfig_2.0.2 haven_2.1.0 xtable_1.8-3
[21] later_0.8.0 generics_0.0.2 withr_2.1.2 lazyeval_0.2.1
[25] cli_1.0.1 magrittr_1.5 crayon_1.3.4 readxl_1.3.0
[29] mime_0.6 nlme_3.1-137 xml2_1.2.0 tools_3.5.2
[33] data.table_1.12.0 hms_0.4.2 munsell_0.5.0 compiler_3.5.2
[37] rlang_0.3.1 rstudioapi_0.9.0 crosstalk_1.0.0 miniUI_0.1.1.1
[41] gtable_0.2.0 codetools_0.2-15 curl_3.3 reshape2_1.4.3
[45] R6_2.4.0 knitr_1.21 Rcpp_1.0.0 xfun_0.5
[49] tidyselect_0.2.5









share|improve this question




























    0















    I'm running the latest R version, 3.5.2 64-bit
    the latest RStudio version, 1.1.463
    and since today I suddenly run into the following problems:



    1) RStudio gives an error ON STARTING UP: 'An error occurred while checking for updates. Unable to establish connection with R session.

    2) It is slow on starting, it is slow on loading the workspace, and it is much slower to run code (working on R shiny app), and that seems to be true for all code files.

    3) I get errors about the data.table packages:




    Loading required package: data.table Warning in library(package,
    lib.loc = lib.loc, character.only = TRUE, logical.return = TRUE, :

    there is no package called ‘data.table’




    I already removed RStudio completely,

    ran registry cleaner freeware,

    reinstalled a new download of RStudio

    updated all packages

    removed all .Rdata files that I could find

    reinstalled Rstudio again....

    and rebooted the laptop several times in between.



    still slow, and still the errors mentioned above...



    I'm clueless what is going on beyond what I tried, does anyone have a clue?



    Yesterday it was all working fine, and now it's not. I did not update anything today on my laptop, the routine is the usual, I start my R Shiny App that I'm working on, and this runs



    if(!require('shiny')) install.packages('shiny')


    for all packages I need for it.
    As I said, it already goes wrong on starting RStudio, and all R code executions seem slow, not just my 1 app.



    Memory usage by rstudio.exe *32 and rsession.exe are both around 300,000 K, so that doesn't seem to be unusual either.



    here is my session info:



     sessionInfo()
    R version 3.5.2 (2018-12-20)
    Platform: x86_64-w64-mingw32/x64 (64-bit)
    Running under: Windows 7 x64 (build 7601) Service Pack 1

    Matrix products: default

    locale:
    [1] LC_COLLATE=Dutch_Netherlands.1252 LC_CTYPE=Dutch_Netherlands.1252
    [3] LC_MONETARY=Dutch_Netherlands.1252 LC_NUMERIC=C
    [5] LC_TIME=Dutch_Netherlands.1252

    attached base packages:
    [1] grid stats graphics grDevices utils datasets methods
    [8] base

    other attached packages:
    [1] flowPeaks_1.26.0 PerformanceAnalytics_1.5.2
    [3] xts_0.11-2 zoo_1.8-4
    [5] gtools_3.8.1 lemon_0.4.3
    [7] gridExtra_2.3 pryr_0.1.4
    [9] scales_1.0.0 stringi_1.3.1
    [11] V8_2.0 taRifx_1.0.6.1
    [13] webshot_0.5.1 broom_0.5.1
    [15] forcats_0.4.0 stringr_1.4.0
    [17] dplyr_0.8.0.1 purrr_0.3.1
    [19] readr_1.3.1 tibble_2.0.1
    [21] tidyverse_1.2.1 randomForest_4.6-14
    [23] yaml_2.2.0 plyr_1.8.4
    [25] colourpicker_1.0 DT_0.5
    [27] tidyr_0.8.3 htmlwidgets_1.3
    [29] plotly_4.8.0 ggplot2_3.1.0
    [31] bit64_0.9-7 bit_1.1-14
    [33] lubridate_1.7.4 shinyWidgets_0.4.5
    [35] shinyjqui_0.3.2 shinyjs_1.0
    [37] shinydashboard_0.7.1 shinyBS_0.61
    [39] shiny_1.2.0

    loaded via a namespace (and not attached):
    [1] httr_1.4.0 jsonlite_1.6 viridisLite_0.3.0 modelr_0.1.4
    [5] assertthat_0.2.0 cellranger_1.1.0 pillar_1.3.1 backports_1.1.3
    [9] lattice_0.20-38 quadprog_1.5-5 glue_1.3.0 digest_0.6.18
    [13] promises_1.0.1 rvest_0.3.2 colorspace_1.4-0 htmltools_0.3.6
    [17] httpuv_1.4.5.1 pkgconfig_2.0.2 haven_2.1.0 xtable_1.8-3
    [21] later_0.8.0 generics_0.0.2 withr_2.1.2 lazyeval_0.2.1
    [25] cli_1.0.1 magrittr_1.5 crayon_1.3.4 readxl_1.3.0
    [29] mime_0.6 nlme_3.1-137 xml2_1.2.0 tools_3.5.2
    [33] data.table_1.12.0 hms_0.4.2 munsell_0.5.0 compiler_3.5.2
    [37] rlang_0.3.1 rstudioapi_0.9.0 crosstalk_1.0.0 miniUI_0.1.1.1
    [41] gtable_0.2.0 codetools_0.2-15 curl_3.3 reshape2_1.4.3
    [45] R6_2.4.0 knitr_1.21 Rcpp_1.0.0 xfun_0.5
    [49] tidyselect_0.2.5









    share|improve this question


























      0












      0








      0








      I'm running the latest R version, 3.5.2 64-bit
      the latest RStudio version, 1.1.463
      and since today I suddenly run into the following problems:



      1) RStudio gives an error ON STARTING UP: 'An error occurred while checking for updates. Unable to establish connection with R session.

      2) It is slow on starting, it is slow on loading the workspace, and it is much slower to run code (working on R shiny app), and that seems to be true for all code files.

      3) I get errors about the data.table packages:




      Loading required package: data.table Warning in library(package,
      lib.loc = lib.loc, character.only = TRUE, logical.return = TRUE, :

      there is no package called ‘data.table’




      I already removed RStudio completely,

      ran registry cleaner freeware,

      reinstalled a new download of RStudio

      updated all packages

      removed all .Rdata files that I could find

      reinstalled Rstudio again....

      and rebooted the laptop several times in between.



      still slow, and still the errors mentioned above...



      I'm clueless what is going on beyond what I tried, does anyone have a clue?



      Yesterday it was all working fine, and now it's not. I did not update anything today on my laptop, the routine is the usual, I start my R Shiny App that I'm working on, and this runs



      if(!require('shiny')) install.packages('shiny')


      for all packages I need for it.
      As I said, it already goes wrong on starting RStudio, and all R code executions seem slow, not just my 1 app.



      Memory usage by rstudio.exe *32 and rsession.exe are both around 300,000 K, so that doesn't seem to be unusual either.



      here is my session info:



       sessionInfo()
      R version 3.5.2 (2018-12-20)
      Platform: x86_64-w64-mingw32/x64 (64-bit)
      Running under: Windows 7 x64 (build 7601) Service Pack 1

      Matrix products: default

      locale:
      [1] LC_COLLATE=Dutch_Netherlands.1252 LC_CTYPE=Dutch_Netherlands.1252
      [3] LC_MONETARY=Dutch_Netherlands.1252 LC_NUMERIC=C
      [5] LC_TIME=Dutch_Netherlands.1252

      attached base packages:
      [1] grid stats graphics grDevices utils datasets methods
      [8] base

      other attached packages:
      [1] flowPeaks_1.26.0 PerformanceAnalytics_1.5.2
      [3] xts_0.11-2 zoo_1.8-4
      [5] gtools_3.8.1 lemon_0.4.3
      [7] gridExtra_2.3 pryr_0.1.4
      [9] scales_1.0.0 stringi_1.3.1
      [11] V8_2.0 taRifx_1.0.6.1
      [13] webshot_0.5.1 broom_0.5.1
      [15] forcats_0.4.0 stringr_1.4.0
      [17] dplyr_0.8.0.1 purrr_0.3.1
      [19] readr_1.3.1 tibble_2.0.1
      [21] tidyverse_1.2.1 randomForest_4.6-14
      [23] yaml_2.2.0 plyr_1.8.4
      [25] colourpicker_1.0 DT_0.5
      [27] tidyr_0.8.3 htmlwidgets_1.3
      [29] plotly_4.8.0 ggplot2_3.1.0
      [31] bit64_0.9-7 bit_1.1-14
      [33] lubridate_1.7.4 shinyWidgets_0.4.5
      [35] shinyjqui_0.3.2 shinyjs_1.0
      [37] shinydashboard_0.7.1 shinyBS_0.61
      [39] shiny_1.2.0

      loaded via a namespace (and not attached):
      [1] httr_1.4.0 jsonlite_1.6 viridisLite_0.3.0 modelr_0.1.4
      [5] assertthat_0.2.0 cellranger_1.1.0 pillar_1.3.1 backports_1.1.3
      [9] lattice_0.20-38 quadprog_1.5-5 glue_1.3.0 digest_0.6.18
      [13] promises_1.0.1 rvest_0.3.2 colorspace_1.4-0 htmltools_0.3.6
      [17] httpuv_1.4.5.1 pkgconfig_2.0.2 haven_2.1.0 xtable_1.8-3
      [21] later_0.8.0 generics_0.0.2 withr_2.1.2 lazyeval_0.2.1
      [25] cli_1.0.1 magrittr_1.5 crayon_1.3.4 readxl_1.3.0
      [29] mime_0.6 nlme_3.1-137 xml2_1.2.0 tools_3.5.2
      [33] data.table_1.12.0 hms_0.4.2 munsell_0.5.0 compiler_3.5.2
      [37] rlang_0.3.1 rstudioapi_0.9.0 crosstalk_1.0.0 miniUI_0.1.1.1
      [41] gtable_0.2.0 codetools_0.2-15 curl_3.3 reshape2_1.4.3
      [45] R6_2.4.0 knitr_1.21 Rcpp_1.0.0 xfun_0.5
      [49] tidyselect_0.2.5









      share|improve this question
















      I'm running the latest R version, 3.5.2 64-bit
      the latest RStudio version, 1.1.463
      and since today I suddenly run into the following problems:



      1) RStudio gives an error ON STARTING UP: 'An error occurred while checking for updates. Unable to establish connection with R session.

      2) It is slow on starting, it is slow on loading the workspace, and it is much slower to run code (working on R shiny app), and that seems to be true for all code files.

      3) I get errors about the data.table packages:




      Loading required package: data.table Warning in library(package,
      lib.loc = lib.loc, character.only = TRUE, logical.return = TRUE, :

      there is no package called ‘data.table’




      I already removed RStudio completely,

      ran registry cleaner freeware,

      reinstalled a new download of RStudio

      updated all packages

      removed all .Rdata files that I could find

      reinstalled Rstudio again....

      and rebooted the laptop several times in between.



      still slow, and still the errors mentioned above...



      I'm clueless what is going on beyond what I tried, does anyone have a clue?



      Yesterday it was all working fine, and now it's not. I did not update anything today on my laptop, the routine is the usual, I start my R Shiny App that I'm working on, and this runs



      if(!require('shiny')) install.packages('shiny')


      for all packages I need for it.
      As I said, it already goes wrong on starting RStudio, and all R code executions seem slow, not just my 1 app.



      Memory usage by rstudio.exe *32 and rsession.exe are both around 300,000 K, so that doesn't seem to be unusual either.



      here is my session info:



       sessionInfo()
      R version 3.5.2 (2018-12-20)
      Platform: x86_64-w64-mingw32/x64 (64-bit)
      Running under: Windows 7 x64 (build 7601) Service Pack 1

      Matrix products: default

      locale:
      [1] LC_COLLATE=Dutch_Netherlands.1252 LC_CTYPE=Dutch_Netherlands.1252
      [3] LC_MONETARY=Dutch_Netherlands.1252 LC_NUMERIC=C
      [5] LC_TIME=Dutch_Netherlands.1252

      attached base packages:
      [1] grid stats graphics grDevices utils datasets methods
      [8] base

      other attached packages:
      [1] flowPeaks_1.26.0 PerformanceAnalytics_1.5.2
      [3] xts_0.11-2 zoo_1.8-4
      [5] gtools_3.8.1 lemon_0.4.3
      [7] gridExtra_2.3 pryr_0.1.4
      [9] scales_1.0.0 stringi_1.3.1
      [11] V8_2.0 taRifx_1.0.6.1
      [13] webshot_0.5.1 broom_0.5.1
      [15] forcats_0.4.0 stringr_1.4.0
      [17] dplyr_0.8.0.1 purrr_0.3.1
      [19] readr_1.3.1 tibble_2.0.1
      [21] tidyverse_1.2.1 randomForest_4.6-14
      [23] yaml_2.2.0 plyr_1.8.4
      [25] colourpicker_1.0 DT_0.5
      [27] tidyr_0.8.3 htmlwidgets_1.3
      [29] plotly_4.8.0 ggplot2_3.1.0
      [31] bit64_0.9-7 bit_1.1-14
      [33] lubridate_1.7.4 shinyWidgets_0.4.5
      [35] shinyjqui_0.3.2 shinyjs_1.0
      [37] shinydashboard_0.7.1 shinyBS_0.61
      [39] shiny_1.2.0

      loaded via a namespace (and not attached):
      [1] httr_1.4.0 jsonlite_1.6 viridisLite_0.3.0 modelr_0.1.4
      [5] assertthat_0.2.0 cellranger_1.1.0 pillar_1.3.1 backports_1.1.3
      [9] lattice_0.20-38 quadprog_1.5-5 glue_1.3.0 digest_0.6.18
      [13] promises_1.0.1 rvest_0.3.2 colorspace_1.4-0 htmltools_0.3.6
      [17] httpuv_1.4.5.1 pkgconfig_2.0.2 haven_2.1.0 xtable_1.8-3
      [21] later_0.8.0 generics_0.0.2 withr_2.1.2 lazyeval_0.2.1
      [25] cli_1.0.1 magrittr_1.5 crayon_1.3.4 readxl_1.3.0
      [29] mime_0.6 nlme_3.1-137 xml2_1.2.0 tools_3.5.2
      [33] data.table_1.12.0 hms_0.4.2 munsell_0.5.0 compiler_3.5.2
      [37] rlang_0.3.1 rstudioapi_0.9.0 crosstalk_1.0.0 miniUI_0.1.1.1
      [41] gtable_0.2.0 codetools_0.2-15 curl_3.3 reshape2_1.4.3
      [45] R6_2.4.0 knitr_1.21 Rcpp_1.0.0 xfun_0.5
      [49] tidyselect_0.2.5






      r performance rstudio






      share|improve this question















      share|improve this question













      share|improve this question




      share|improve this question








      edited Mar 7 at 18:44







      Mark

















      asked Mar 7 at 18:39









      MarkMark

      769525




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