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AWS copy command does not work in EC2 instance with python psycopg2


How to install psycopg2 with “pip” on Python?scp (secure copy) to ec2 instance without passwordChange key pair for ec2 instanceTrying to SSH into an Amazon Ec2 instance - permission errorCopying data from S3 to AWS redshift using python and psycopg2Redshift copy command from S3 works, but no data uploadedCopy Redshift table from S3 csv file using Python?How to execute AWS S3 to Redshift Copy command from SQL script?vb.net stuck on AWS Redshift Copy commandConnecting to a remote Redshift cluster from an EC2 with psycopg2 via UserData in CloudFormation template













0















When I'm using SQL workbench, the AWS copy command works well.
The purpose is to copy S3 data to Redshift table.
Here's the copy command I'm using:



copy oao_features_usbank_v2 from 's3://my_bucket/test_data.csv' iam_role 'arn:aws:iam::accountid:role/my_role' CSV IGNOREHEADER 1 MAXERROR 10 DELIMITER as '|';


Then when using python psycopg2. I have tried multiple connection methods, none of them work. Such as:



conn_string = 'postgresql://username:pwd@host:port/db'
copy_query = 'copy oao_features_usbank_v2 from 's3://my_bucket/test_data.csv' iam_role 'arn:aws:iam::accountid:role/my_role' CSV IGNOREHEADER 1 MAXERROR 10 DELIMITER as '|';'

with psycopg2.connect(conn_string) as conn:
with conn.cursor() as curs:
curs.execute(copy_query)
conn.commit()









share|improve this question


























    0















    When I'm using SQL workbench, the AWS copy command works well.
    The purpose is to copy S3 data to Redshift table.
    Here's the copy command I'm using:



    copy oao_features_usbank_v2 from 's3://my_bucket/test_data.csv' iam_role 'arn:aws:iam::accountid:role/my_role' CSV IGNOREHEADER 1 MAXERROR 10 DELIMITER as '|';


    Then when using python psycopg2. I have tried multiple connection methods, none of them work. Such as:



    conn_string = 'postgresql://username:pwd@host:port/db'
    copy_query = 'copy oao_features_usbank_v2 from 's3://my_bucket/test_data.csv' iam_role 'arn:aws:iam::accountid:role/my_role' CSV IGNOREHEADER 1 MAXERROR 10 DELIMITER as '|';'

    with psycopg2.connect(conn_string) as conn:
    with conn.cursor() as curs:
    curs.execute(copy_query)
    conn.commit()









    share|improve this question
























      0












      0








      0


      1






      When I'm using SQL workbench, the AWS copy command works well.
      The purpose is to copy S3 data to Redshift table.
      Here's the copy command I'm using:



      copy oao_features_usbank_v2 from 's3://my_bucket/test_data.csv' iam_role 'arn:aws:iam::accountid:role/my_role' CSV IGNOREHEADER 1 MAXERROR 10 DELIMITER as '|';


      Then when using python psycopg2. I have tried multiple connection methods, none of them work. Such as:



      conn_string = 'postgresql://username:pwd@host:port/db'
      copy_query = 'copy oao_features_usbank_v2 from 's3://my_bucket/test_data.csv' iam_role 'arn:aws:iam::accountid:role/my_role' CSV IGNOREHEADER 1 MAXERROR 10 DELIMITER as '|';'

      with psycopg2.connect(conn_string) as conn:
      with conn.cursor() as curs:
      curs.execute(copy_query)
      conn.commit()









      share|improve this question














      When I'm using SQL workbench, the AWS copy command works well.
      The purpose is to copy S3 data to Redshift table.
      Here's the copy command I'm using:



      copy oao_features_usbank_v2 from 's3://my_bucket/test_data.csv' iam_role 'arn:aws:iam::accountid:role/my_role' CSV IGNOREHEADER 1 MAXERROR 10 DELIMITER as '|';


      Then when using python psycopg2. I have tried multiple connection methods, none of them work. Such as:



      conn_string = 'postgresql://username:pwd@host:port/db'
      copy_query = 'copy oao_features_usbank_v2 from 's3://my_bucket/test_data.csv' iam_role 'arn:aws:iam::accountid:role/my_role' CSV IGNOREHEADER 1 MAXERROR 10 DELIMITER as '|';'

      with psycopg2.connect(conn_string) as conn:
      with conn.cursor() as curs:
      curs.execute(copy_query)
      conn.commit()






      python-3.x amazon-s3 amazon-ec2 amazon-redshift psycopg2






      share|improve this question













      share|improve this question











      share|improve this question




      share|improve this question










      asked Mar 8 at 1:49









      Cherry WuCherry Wu

      92531937




      92531937






















          2 Answers
          2






          active

          oldest

          votes


















          1














          Try something like this:



          import psycopg2

          db = "your_database"
          host = "redshift_end_point"
          port = "5439"
          user = "your_user_here"
          pwd = "your_password_here"
          connstr = "dbname=%s host=%s port=%s user=%s password=%s" % (db, host, port, user, pwd)

          con = psycopg2.connect(connstr)


          The Redshift end point can be found in the AWS console. It will look something like:



          clustername.sofhsdl34534.us-east-1.redshift.amazonaws.com


          Your EC2 instance should also have a Security Group attached that allows connecting to Redshift.






          share|improve this answer






























            0














            Try inserting your copy_query into multiple line string like below:
            copy_query = """copy oao_features_usbank_v2 from 's3://my_bucket/test_data.csv' iam_role 'arn:aws:iam::accountid:role/my_role' CSV IGNOREHEADER 1 MAXERROR 10 DELIMITER as '|';' """



            So that python code will take all the string inside of three quotes as your copy command






            share|improve this answer






















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              2 Answers
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              2 Answers
              2






              active

              oldest

              votes









              active

              oldest

              votes






              active

              oldest

              votes









              1














              Try something like this:



              import psycopg2

              db = "your_database"
              host = "redshift_end_point"
              port = "5439"
              user = "your_user_here"
              pwd = "your_password_here"
              connstr = "dbname=%s host=%s port=%s user=%s password=%s" % (db, host, port, user, pwd)

              con = psycopg2.connect(connstr)


              The Redshift end point can be found in the AWS console. It will look something like:



              clustername.sofhsdl34534.us-east-1.redshift.amazonaws.com


              Your EC2 instance should also have a Security Group attached that allows connecting to Redshift.






              share|improve this answer



























                1














                Try something like this:



                import psycopg2

                db = "your_database"
                host = "redshift_end_point"
                port = "5439"
                user = "your_user_here"
                pwd = "your_password_here"
                connstr = "dbname=%s host=%s port=%s user=%s password=%s" % (db, host, port, user, pwd)

                con = psycopg2.connect(connstr)


                The Redshift end point can be found in the AWS console. It will look something like:



                clustername.sofhsdl34534.us-east-1.redshift.amazonaws.com


                Your EC2 instance should also have a Security Group attached that allows connecting to Redshift.






                share|improve this answer

























                  1












                  1








                  1







                  Try something like this:



                  import psycopg2

                  db = "your_database"
                  host = "redshift_end_point"
                  port = "5439"
                  user = "your_user_here"
                  pwd = "your_password_here"
                  connstr = "dbname=%s host=%s port=%s user=%s password=%s" % (db, host, port, user, pwd)

                  con = psycopg2.connect(connstr)


                  The Redshift end point can be found in the AWS console. It will look something like:



                  clustername.sofhsdl34534.us-east-1.redshift.amazonaws.com


                  Your EC2 instance should also have a Security Group attached that allows connecting to Redshift.






                  share|improve this answer













                  Try something like this:



                  import psycopg2

                  db = "your_database"
                  host = "redshift_end_point"
                  port = "5439"
                  user = "your_user_here"
                  pwd = "your_password_here"
                  connstr = "dbname=%s host=%s port=%s user=%s password=%s" % (db, host, port, user, pwd)

                  con = psycopg2.connect(connstr)


                  The Redshift end point can be found in the AWS console. It will look something like:



                  clustername.sofhsdl34534.us-east-1.redshift.amazonaws.com


                  Your EC2 instance should also have a Security Group attached that allows connecting to Redshift.







                  share|improve this answer












                  share|improve this answer



                  share|improve this answer










                  answered Mar 8 at 2:52









                  Nathan GriffithsNathan Griffiths

                  8,76022239




                  8,76022239























                      0














                      Try inserting your copy_query into multiple line string like below:
                      copy_query = """copy oao_features_usbank_v2 from 's3://my_bucket/test_data.csv' iam_role 'arn:aws:iam::accountid:role/my_role' CSV IGNOREHEADER 1 MAXERROR 10 DELIMITER as '|';' """



                      So that python code will take all the string inside of three quotes as your copy command






                      share|improve this answer



























                        0














                        Try inserting your copy_query into multiple line string like below:
                        copy_query = """copy oao_features_usbank_v2 from 's3://my_bucket/test_data.csv' iam_role 'arn:aws:iam::accountid:role/my_role' CSV IGNOREHEADER 1 MAXERROR 10 DELIMITER as '|';' """



                        So that python code will take all the string inside of three quotes as your copy command






                        share|improve this answer

























                          0












                          0








                          0







                          Try inserting your copy_query into multiple line string like below:
                          copy_query = """copy oao_features_usbank_v2 from 's3://my_bucket/test_data.csv' iam_role 'arn:aws:iam::accountid:role/my_role' CSV IGNOREHEADER 1 MAXERROR 10 DELIMITER as '|';' """



                          So that python code will take all the string inside of three quotes as your copy command






                          share|improve this answer













                          Try inserting your copy_query into multiple line string like below:
                          copy_query = """copy oao_features_usbank_v2 from 's3://my_bucket/test_data.csv' iam_role 'arn:aws:iam::accountid:role/my_role' CSV IGNOREHEADER 1 MAXERROR 10 DELIMITER as '|';' """



                          So that python code will take all the string inside of three quotes as your copy command







                          share|improve this answer












                          share|improve this answer



                          share|improve this answer










                          answered yesterday









                          Vin OdhVin Odh

                          26915




                          26915



























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